Lyme disease, science, and society: Camp Other
Showing posts with label mullis. Show all posts
Showing posts with label mullis. Show all posts

Thursday, March 10, 2011

3 Mullis' PCR and Borrelia burgdoferi's discovery

Remember I got a pile of books on loan to read? And remember that eccentric Nobel prize winner, Kary Mullis, who was featured in a TED video I posted?

According to Bull's Eye: Unraveling the Medical Mystery of Lyme Disease, Kary's new invention, developed in 1983 - Polymerase Chain Reaction (PCR) - was instrumental in learning more about Borrelia burgdorferi's history:
"One medical researcher who was quick to apply this technique in the medical arena was Dr. David Persing, then at the Yale University Department of Pathology. Being at Yale, Persing was interested in Lyme disease. Among many other projects, he and colleagues used PCR on 102 dried-out or alcohol-preserved tick specimens from the Museum in Comparative Zoology in Cambridge, Massachussetts. The ticks had been collected from various areas in New England between 1945 and 1951; each was tagged with the exact location where they had been collected. The researchers also examined another batch of ticks from the Smithsonian collection in Washington, D.C., some dating back as far as 1924. They found ticks that were positive for the DNA of B. burgdorferi from Montauk Point and from the adjacent Heather Hills State Park from the mid-1940s. 
Several years later, the same group with additional colleagues reported the results of similar experiments done on tiny biopsy specimens taken from the ears of archived mice from the same museum. They found two specimens that tested positive by PCR anaylsis for B. burgdorferi from mice orginally captured near Dennis, Massachusetts (on Cape Cod), in 1894! The DNA from these specimens was identical to the B31 strain that Willy Burgdorfer had found on Shelter Island. 
European investigators have reproduced these experiments using archived ticks from various parts of Europe including England and have found borrelial DNA dating back to the late 1880s as well. If the Lyme spirochete had been around for so long, why did it begin to surface as a recognized medical entity only in the past few decades? This question can be answered in one word --- deer."

I always find history fascinating, especially the connections between technology and information gathering. Here the PCR was invented around shortly after the time that news that Borrelia burgdorferi was the agent of Lyme disease was published in Science in 1982. We know far more about Bb now than we would have if this (or a similar technology) had not been developed at the time it was.
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Thursday, January 6, 2011

0 TED Talk: Aiding the immune system to fight infection

I caught this talk recently on TED that was more of a teaser for me. I found it interesting and wanted to share here.

About this TED Talk

Drug-resistant bacteria kills, even in top hospitals. But now tough infections like staph and anthrax may be in for a surprise. Nobel-winning chemist Kary Mullis, who watched a friend die when powerful antibiotics failed, unveils a radical new cure that shows extraordinary promise.(Recorded at TED 2009, February 2009 in Long Beach, California. Duration: 4:35)



[ More here, in an interview with Kary Mullis. ]

So, in case you didn't know, in the early 1980s, Kary Mullis developed the polymerase chain reaction (PCR), which is a way of making copies of a DNA strand using the enzyme polymerase and some basic DNA "building blocks." Mullis shared the 1993 Nobel Prize in Chemistry for developing this technique.

But Mullis has moved on to doing research on chemically programmable immunity using Altermune technology.

Altermune, LLC, in collaboration with Ron Cook of Biosearch in Novato, CA, re-directed antibodies whose job used to be binding to something called the alpha-Gal epitope or galactose-alpha-1,3-galactosyl-beta-1,4-N0-acetyl glucosamine (now say that three times fast, I dare you) to influenza using DNA aptamers attached to the alpha-Gal epitope.

These linkers can grab influenza virion and turn it over to a human macrophage, which gobbles it up. Testing was done using a drug that can be inhaled.

Altermune is currently focusing on Influenza A and drug resistant Staphylococcus aureus.

This is fascinating.

Programming your own immune system to more effectively fight infections.

I've been wondering what other technologies we could use to combat infection and avoid the issue of antibiotic resistance, which is becoming more crucial as there has been little in the way of new antibiotic research and development during the past decade.

If Kary Mullis can help us use our own immune systems to effectively fight infection, maybe we can not only avoid resistance - but the side effects of many antibiotics and antiviral medications as well.

I'm sure there are some drawbacks and kinks to work out. I'm wondering, for example, how this technology handles transfections. I need to replay the entire TED talk and watch it again, and read the research.

In the meantime, if you are up to the task, here is a more technical Powerpoint presentation on Altermune I have found online:

www.bibalex.org/supercourse/supercoursePPT/37011-38001/38071.ppt

Note of bizarreness: Read the comments on the original TED post. Apparently Mullis is an AIDS denialist? Does anyone know about that?

Dig out your googling chops... the more you learn about Mullis, the more bizarre his story becomes.
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