Lyme disease, science, and society: Camp Other
Showing posts with label biology. Show all posts
Showing posts with label biology. Show all posts

Friday, March 23, 2012

0 Babesiosis Fatality In Australia

Earlier this week, the Australian television show Today Tonight aired a story about a 56 year old man from New South Wales who died from Babesiosis. There is some concern by others that the man contracted the infection within Australia and not overseas, though more evidence is needed this is the case.

Babesiosis is a tickborne illness caused by a protozoan parasite, Babesia, which infects red blood cells and produces symptoms which are similar to those found in malaria. It can be subclinical and cause no to mild symptoms - but it can also lead to moderate and severe symptoms. And sadly, as we've seen - even kill people.

People who are most likely to have severe symptoms are the elderly, those with compromised immune systems, and those who do not have a spleen.

I know firsthand what Babesiosis is like because several months after I was bitten by a tick, new symptoms showed up in me which were indicative of an infection with Babesia. I also was fortunate to get a positive blood smear - not something which is easily accomplished in the lab.

The most obvious symptoms I experienced were an ongoing shortness of breath with the sensation of a vice-like grip around my ribs, breaking out into sweats at night, "flash" fevers, and anemia. There were other less known symptoms as well, but these are among the most common. Fortunately, I think (I hope) I have beat this coinfection, and it has not beat me.

As it stands, the United States has seen a number of its own deaths due to Babesia, and according to an article in the New York Times, in coastal Rhode Island, the number of cases of Babesia are around 25% less than those of Lyme disease - in an area which is highly endemic for Lyme disease. And not only is Babesia becoming quite common in northeastern states - it's spreading to the northern midwest as well and was already found on the west coast.

One important thing to be aware of is not only can Babesia be transmitted by ticks - it can be spread through the blood supply via donations and transfusions. Thus far, there are twelve people who have died from Babesia spread through blood transfusions in the US. It is unknown, though, how many people may have been infected with Babesia through the blood supply and currently carry a more subclinical infection that may become more evident later.

There is currently no blood screening test available for donations and transfusions, and research is underway to develop such a test to avoid spreading more Babesia through the blood supply. So I highly recommend that if you have to get surgery and know this in advance, that you blood bank your own blood in preparation in case you need a transfusion.

You can view the dramatic video of the Today Tonight story here [4:46 minutes, plus short ad]:




Read this link for a full transcript of the show:

http://au.news.yahoo.com/today-tonight/latest/article/-/13207421/tick-timebomb/

For more information about Babesia and Babesiosis, check out these links:

Specific to Australia: http://lymedisease.org.au/about-lyme-disease/babesiosis/

About the Lifecycle: http://www.stanford.edu/group/parasites/ParaSites2006/Babesiosis/lifecycle.html

About Treatment: http://emedicine.medscape.com/article/780914-treatment



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Thursday, July 28, 2011

9 Borrelia Infection in Ticks in Norway


ScienceDaily (June 24, 2011) — The most common tick-borne disease in humans is Lyme borreliosis. Extensive field and laboratory tests have revealed that the Borrelia bacterium is present in a larger proportion of ticks than has been shown by earlier studies. Another finding is that migratory birds play an important role in the spreading of ticks and pathogenic agents borne by ticks.

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Comments:

The researcher working on this project, Vivian Kjelland, found a strong correlation between the spread of Borrelia bacteria and birds in Norway - and discovered a decline in the hare population had little to do with Borrelia infection.

Perhaps the most interesting or surprising part of her research is this: Kjelland's doctoral thesis indicates that there is a lower incidence of the Borrelia bacterium in ticks that have sucked blood from deer and moose than in ticks collected from the ground/vegetation.

One thing to keep in mind with research in Norway as well as other countries is that the shouts of "kill all the deer" in order to stop Lyme disease may not be the best decision, as ticks will colonize other animals and take blood meals from them instead. What happens all depends on the local ecology and which host animals are available.

We can't kill all the potential hosts for ticks. Other solutions to fighting Lyme disease and related tickborne illnesses need to be found.

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Friday, April 15, 2011

0 The Friday Four

In this edition of the Friday Four, we'll look at the impact of antibiotics on bacteria in dogs' intestines, how fire-bellied toads can help us fight germs, antibiotic cocktails in wasp cocoons, and the effect of stress on your gut flora.

1) Impact of antibiotic treatments on bacteria in the intestines of animals

Source Link: http://www.sciencedaily.com/releases/2010/04/100413081238.htm

ScienceDaily (2010-04-13) -- Recent research from Norway has found that resistance to antibiotics is on the increase in intestinal bacteria in animals as a direct result of antibiotic treatments. The antibiotics also alter the composition of bacteria in the intestines. These discoveries provide more knowledge about the undesirable effect of antibiotic treatments and are of comparative interest as regards other animals and humans.

Comments:

This article is about how within a few days of antibiotic treatment, healthy dogs had a lot of antibiotic resistant E. coli bacteria in their intestines. I shudder to think of the state of my own intestines, after many months of antibiotic use.

I don't know if I really have much to say here, other than to say this: The article quoted nearly 50% of all worldwide antibiotic use is veterinary - I wonder what percentage of that 50% is for factory farms and not for people's pets? Antibiotics should be conserved for pets and people on the rare occasion they need them, and this should have been done all along. 

Now we're facing a crisis situation with antibiotic resistance, one which is most readily observed in our hospitals. And not just our hospitals, but our kitchens...

This was the eye-opener today:

Nationwide study finds US meat and poultry is widely contaminated

Multi-drug-resistant Staph found in nearly 1 in 4 samples, review shows


FLAGSTAFF, Ariz. — April 15, 2011 — Drug-resistant strains of Staphylococcus aureus, a bacteria linked to a wide range of human diseases, are present in meat and poultry from U.S. grocery stores at unexpectedly high rates, according to a nationwide study by the Translational Genomics Research Institute (TGen).

Nearly half of the meat and poultry samples — 47 percent — were contaminated with S. aureus, and more than half of those bacteria — 52 percent — were resistant to at least three classes of antibiotics, according to the study published today in the journal Clinical Infectious Diseases.


Please COOK YOUR FOOD THOROUGHLY.

Other methods of fighting bacterial infections which do not promote resistance must be found.

Which leads us to the next two entries of this Friday Four...


2) Giant fire-bellied toad's brain brims with powerful germ-fighters

Source link: http://www.sciencedaily.com/releases/2011/04/110413121010.htm

ScienceDaily (2011-04-13) -- Frog and toad skins already are renowned as cornucopias of hundreds of germ-fighting substances. Now a new report reveals that the toad brains also may contain an abundance of antibacterial and antiviral substances that could inspire a new generation of medicines.

Comments:

So the "germ-fighting substances" they're talking about are peptides. Many of these peptides were shown to be homologous to hormones and neurotransmitters of mammals. And in recent years it has been shown that these secretions also contain a multitude of antimicrobial peptides.

So in the original research report above, 79 antimicrobial peptides were found to be encoded by 158 cDNA clones from B. maxima (the giant fire bellied toad - see photo to left) and B. microdeladigitora brain cDNA libraries, and of those 79, 20 were the same as ones which had been found before - but 59 were previously unknown and new antimicrobial peptides. These peptides worked against Gram-positive and Gram-negative bacteria and fungi.

Earlier research on these other amphibian-derived peptides have shown that some have activity against mycoplasma infections, HIV, and Staphlococcus aureus.

Antibiotics have been derived from peptides for many years now - some synthetically, like polymyxins and bacitracins - and some are natural, nonsynthetic antibiotics, like melittin (which peptides had to be derived from - melittin itself was not used due to its hemolytic properties) and manuka honey itself.

The latter group rely on observing natural host defenses (as nature’s antibiotics) and the clinical potential of peptides derived from these natural sources - amphibians, insects, mammals, and plants - is something that continues to be studied. These natural antibiotics may replace more of our currently existing selection of antibiotics due to increasing resistance.

Source Reference:
Rui Liu, Huan Liu, Yufang Ma, Jing Wu, Hailong Yang, Huahu Ye, Ren Lai. There are Abundant Antimicrobial Peptides in Brains of Two Kinds ofBombinaToads.Journal of Proteome Research, 2011; 10 (4): 1806 DOI:10.1021/pr101285n

3) Bacteria in wasp antennae produce antibiotic cocktails

Source link: http://www.sciencedaily.com/releases/2011/04/110411194823.htm

ScienceDaily (2011-04-12) -- Bacteria that grow in the antennae of wasps help ward off fungal threats by secreting a 'cocktail' of antibiotics, according to researchers.

Comments:

Who knew that a particular wasp - the beewolf wasp (weird name?) - could have something in common with Lyme disease patients?

These crafty little buggers have their own prophylactic antibiotics right on the outside of their cocoons, so that they are protected from disease when they are transforming from larvae into wasps.

Female beewolf digger wasps cultivate symbiotic Streptomyces bacteria in unique antennal glands and secrete them into their larval brood cells. Then the larvae take up the bacteria and weave them into the cocoon while spinning it. The result is a cocoon which produces at least 9 different antibiotic and antifungal substances.

The article makes a statement that reflects the fact that a number of LLMDs have been ahead of the curve when it comes to treating infections. It states:

"A similar combination prophylaxis (also known as combination therapy) approach is increasingly used in human medicine. Such a treatment exploits the complementary action of two or more antibiotics. It results in a higher efficacy against a broader spectrum of pathogens and is known to prevent micro-organisms from developing resistance to the antibiotic substance."

There is a logic behind combination antibiotic treatment - testing and documenting the efficacy of such combinations goes a long way to supporting long-term antibiotic use where it is needed, especially if lack of resistance can be shown.

The beewolf larva hibernates for several months in its cocoon before the 
adult insect hatches. Antibiotics on the surface of the cocoon, produced by symbionts, guarantee protection against microbial pests during such a protracted developmental stage. The amount of antibiotics was visualized by means of imaging techniques based on mass spectrometry 
(LDI imaging) and merged as pseudocolors onto the cocoon.
Credit: Johannes Kroiss and Martin Kaltenpoth, MPI for Chemical Ecology, Jena (Photomontage).

Source reference:
http://www.sgm.ac.uk/default.cfm

4) Don't Stress - It messes with your gut flora

Source Link: http://researchnews.osu.edu/archive/immunegut.htm

Research out of Ohio State University informs us more about the value of the mind-body connection in affecting our health.

Stress not only sends the human immune system into overdrive - it can also wreak havoc on the trillions of bacteria that work and thrive inside our digestive system. New research suggests that this may be important because those bacteria play a significant role in triggering the innate immune system to stay slightly active, and thereby prepared to quickly spring into action in the face of an infection.

So this is what the study was about:
For two hours daily for six days, an aggressive mouse was placed in a cage of a group of more docile, laid-back mice.

At the end of the string of experiments, blood samples were taken from both stressed animals and matched mice from a control group, along with samples of material from inside each animal’s intestine. The blood samples were analyzed to detect the levels of two biomarkers used to gauge stress – a cytokine called interleukin-6 (IL-6) and a protein called MCP-1 that summons macrophages, or scavenger cells, to the site of an infection.

From the intestinal samples, Bailey’s team could determine the relative proportion of at least 30 types of bacteria residing there.

“We know now that if we knock the population of bacteria down with antibiotics, we don’t have the same innate immune response,” Bailey said. “That showed that the bacteria are involved in the ability of stress to prime the innate immune system.”

Compared to the control mice, the stressed animals showed two marked differences: The proportion of one important type of bacteria in the gut – Bacteroidesfell by 20 to 25 percent while another type – Clostridiumincreased a similar amount. Also, levels of the two biomarkers, IL-6 and MCP-1, jumped 10-fold in the stressed mice, compared to controls.

The researchers then treated stressed mice with broad-spectrum antibiotics that could kill as much as 90 percent of the intestinal bacteria for a short period. When they again looked at the two immune biomarkers in the stressed mice, they saw only a doubling of IL-6 and MCP-1 – an increase only one-fifth as much.
Comments:

Stress really affects the immune system - who knew? It's well-known it does, but what isn't known is exactly how it does this - and what can be done other than to get people out of your life who act like aggressive mice.

There is evidence here that stress increases the population of unfriendly and harmful bacteria, and later on, the use of antibiotics knocks down the bacteria needed to prime the immune system.

Healthy stress management and joy are needed in one's life, even while fighting off illness. Especially while fighting off illness.
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Thursday, March 31, 2011

17 Video: Shortcuts To Learning Immunology

I realize I posted a 14 part mini-series on Immunology not long ago and know that could be a bit much to bite off at once in order to learn more about the immune system.

So I've been spending time looking for shortcuts - ways for readers to quickly get up to speed on some of the terms and processes used when discussing the immune system.

I figure videos usually are the best way to begin learning for many people - so I have been watching them on Youtube to decide what to post here.

Let me just say that as entertaining as some of them are, I wish more of them were factually correct or just had more educational content in them.

I love the idea of using battle scenes from The Lord of the Rings movies as an analogy for the immune system - some creative guy did this, and it was hilarious. But most of it had no mention of the immune system or how it worked, beyond "the good guys are these immune cells, and the orcs are the invading pathogens". And then there was the guy who went so far as to make a 1950's style documentary on angry macrophages, with retro props and a fake ad for Solomon cigarettes... this documentary compared pathogens to invading Communists.

Unique. Original. Points for style. And yet, next to no substance.

What could have been both an entertaining and educational clip ended up an abysmal failure. C'mon guys, you can do better.


Anyway, I found what I hope are some of the better videos on Youtube that you can watch to learn more about the immune system, and the material on the first one will help you advance to the next video. Also, each video reinforces what you've seen in an earlier one - it helps familiarize you with the terms and concepts used.

Let me know if you have any trouble following these. For those of you who are already more advanced students of immunology and have gotten past all of this, I will be posting more intermediate and advanced videos on the immune system later. (Those who have watched these basic and intermediate videos first will be able to move on to the advanced section, which will mention toll-like receptors and interleukins.)

If you are a more advanced student and already understand those, then I would like to encourage you to comment more here and perhaps start your own blog to let people know more about the science of the immune system and infectious diseases like Lyme disease.

Knowing more about the immune system opens the door to understanding research out there done by the IDSA guidelines panel, scientific researchers in microbiology and molecular biology outside of the IDSA panel, the statements LLMDs have made about Lyme disease and its treatment, and claims other Lyme patients have made online.

Okay, without further delay, here are four videos which may prove useful for beginners - each under 10 minutes:

Immunology Overview [Time: 4:42] - overview of basic parts and terms of the immune system


The Immune System [Time: 9:36] - Basic explanation of the immune system and how it works.

Immune System, Part 1 [Time: 7:59] - Barriers and Non-Specific Defenses
Note that this video is accompanied by this easy to view PDF:
http://www.kirkwood.edu/pdf/uploaded/695/immune_and_lymphatic2.pdf



The Immune Response (Garland Science) [Time: 1:43]


That should be good to get you started.

Note that each one has slightly different information about the immune system, but the core material is the same. Being exposed to this information in different ways over time makes it easier to learn.
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Monday, February 21, 2011

0 Free Video Lectures & Podcasts: UC Berkeley Molecular and Cell Biology

For those of you who use iTunes to download podcasts and have the ability to learn by listening - or hope to absorb information through repetition and osmosis - there are FREE audio podcasts on Molecular and Cell Biology from UC Berkeley you can download from iTunes.

There are also some video podcasts of the classes available on iTunes and both audio and video podcasts can be found on UC Berkeley's webcast site.

If you're new to studying biology, I highly recommend starting with a basic biology course first, - such as this Biology 1A lecture at Berkeley and/or these Biology video podcasts from MIT - then this class:

Molecular and Cell Biology 110, 001|Fall 2009|UC Berkeley
by Qiang ZHOU, qing zhong, Thomas C. ALBER
Download up to 41 classes (start with session 1 at bottom of podcast list!)
http://itunes.apple.com/itunes-u/molecular-cell-biology-110/id354820350


Followed by its more advanced class:

Molecular and Cell Biology 130, 001|Spring 2009|UC Berkeley

by Randy W SCHEKMAN, Kunxin LUO, David G. DRUBIN
Download up to 42 classes (start with session 1 at bottom of podcast list!)
http://itunes.apple.com/us/itunes-u/molecular-cell-biology-130/id354820424

If you do not have iTunes, you can also go directly to UC Berkeley's webcast site and WATCH and listen to these classroom lectures for free, on a variety of topics.


I realize this may be challenging for many Lyme patients dealing with cognitive issues and "brain fog", but I put the information out there because it can be useful to learn to decipher the studies and research you may come across from the IDSA, ILADS, and other groups. Knowledge is power, and the great things about these videocasts and podcasts are:
  • You can play and replay each podcast as often as you like.
  • You can learn at your own pace.
  • You can share these links with others and talk about what they learned at their pace.
  • You can watch some and listen to others - work with your best learning style.
  • They are absolutely FREE - do you have any idea how much each unit at UC Berkeley costs?
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The Camp Other Song Of The Month


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